Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fpra family a-type flavoprotein | DW035_11875 | Not Available | Positive | 2755359 - 2756549 | 44850.2 |
| mechanosensitive ion channel family protein | DW035_11880 | Not Available | Negative | 2756633 - 2757499 | 31778.0 |
| threonylcarbamoyl-amp synthase | DW035_11885 | Not Available | Negative | 2757531 - 2758142 | 22910.9 |
| helicase | DW035_11890 | Not Available | Negative | 2758192 - 2760192 | 76648.6 |
| mate family efflux transporter | DW035_11895 | Not Available | Positive | 2760764 - 2762131 | 49533.0 |
| crp/fnr family transcriptional regulator | DW035_11900 | Not Available | Positive | 2762518 - 2763084 | 22559.2 |
| acyltransferase | DW035_11905 | Not Available | Positive | 2763180 - 2764331 | 42949.6 |
| dna topoisomerase iii | DW035_11910 | Not Available | Negative | 2764424 - 2766583 | 81195.5 |
| hypothetical protein | DW035_11915 | Not Available | Positive | 2766727 - 2767407 | 24717.3 |
| histidine--trna ligase | DW035_11920 | Not Available | Positive | 2767490 - 2768854 | 50211.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

