Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l11 | DW035_01005 | Not Available | Positive | 262958 - 263401 | 15713.3 |
| 50s ribosomal protein l1 | DW035_01010 | Not Available | Positive | 263418 - 264116 | 24993.7 |
| 50s ribosomal protein l10 | DW035_01015 | Not Available | Positive | 264133 - 264648 | 18408.3 |
| 50s ribosomal protein l7/l12 | DW035_01020 | Not Available | Positive | 264729 - 265106 | 12707.2 |
| dna-directed rna polymerase subunit beta | DW035_01025 | Not Available | Positive | 265265 - 269077 | 142474.0 |
| dna-directed rna polymerase subunit beta' | DW035_01030 | Not Available | Positive | 269154 - 273440 | 158891.0 |
| hypothetical protein | DW035_01035 | Not Available | Negative | 273618 - 274037 | 15887.2 |
| magnesium transporter cora family protein | DW035_01040 | Not Available | Negative | 274049 - 274975 | 35584.1 |
| Trna-asn | Not Available | Not Available | Positive | 275159 - 275232 | Not Available |
| adenosine kinase | DW035_01050 | Not Available | Positive | 275312 - 276298 | 35427.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

