Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ahpc/tsa family protein | DW035_11725 | Not Available | Positive | 2720282 - 2721382 | 40323.6 |
| mfs transporter | DW035_11730 | Not Available | Negative | 2721476 - 2723020 | 56943.2 |
| tetratricopeptide repeat protein | DW035_11735 | Not Available | Negative | 2723155 - 2723775 | 23541.8 |
| aminoglycoside phosphotransferase family protein | DW035_11740 | Not Available | Positive | 2723983 - 2725065 | 41674.1 |
| acyltransferase | DW035_11745 | Not Available | Negative | 2725229 - 2725786 | 21266.4 |
| hypothetical protein | DW035_11750 | Not Available | Negative | 2725793 - 2726134 | 12976.8 |
| penicillin-binding protein | DW035_11755 | Not Available | Positive | 2726445 - 2728370 | 73794.5 |
| yjbq family protein | DW035_11760 | Not Available | Negative | 2728372 - 2728785 | 15357.3 |
| hypothetical protein | DW035_11765 | Not Available | Negative | 2728879 - 2729355 | 18763.6 |
| hypothetical protein | DW035_11770 | Not Available | Negative | 2729526 - 2730287 | 29381.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

