Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sss family transporter | DW035_11675 | Not Available | Negative | 2706129 - 2707874 | 64692.4 |
| hypothetical protein | DW035_11680 | Not Available | Positive | 2708168 - 2708434 | 9939.41 |
| flagellar motor protein motb | DW035_11685 | Not Available | Negative | 2708978 - 2709820 | 31684.3 |
| feob-associated cys-rich membrane protein | DW035_11690 | Not Available | Negative | 2709851 - 2710009 | 5683.09 |
| ferrous iron transport protein b | DW035_11695 | Not Available | Negative | 2710024 - 2712501 | 92395.7 |
| trna lysidine(34) synthetase tils | DW035_11700 | Not Available | Positive | 2712629 - 2713903 | 48392.3 |
| histone h1 | DW035_11705 | Not Available | Positive | 2714020 - 2714196 | 6410.83 |
| duf5113 domain-containing protein | DW035_11710 | Not Available | Positive | 2714352 - 2718779 | 169427.0 |
| dna-binding response regulator | DW035_11715 | Not Available | Positive | 2718811 - 2719533 | 27524.6 |
| abgt transporter | DW035_11720 | Not Available | Positive | 2719523 - 2720206 | 24956.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

