Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| blai/meci/copy family transcriptional regulator | DW035_11525 | Not Available | Positive | 2672889 - 2673254 | 14212.0 |
| m56 family peptidase | DW035_11530 | Not Available | Positive | 2673267 - 2674535 | 48146.4 |
| tlpa family protein disulfide reductase | DW035_11535 | Not Available | Positive | 2674653 - 2675861 | 46123.4 |
| hypothetical protein | DW035_11540 | Not Available | Positive | 2675951 - 2676340 | 14244.3 |
| biotin synthase biob | DW035_11545 | Not Available | Positive | 2676390 - 2677352 | 35528.9 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | DW035_11550 | Not Available | Positive | 2677342 - 2678631 | 47907.0 |
| 8-amino-7-oxononanoate synthase | DW035_11555 | Not Available | Positive | 2678650 - 2679825 | 43659.7 |
| duf452 family protein | DW035_11560 | Not Available | Positive | 2679846 - 2680514 | 25643.4 |
| malonyl-[acyl-carrier protein] o-methyltransferase bioc | DW035_11565 | Not Available | Positive | 2680499 - 2681248 | 28453.1 |
| atp-dependent dethiobiotin synthetase biod | DW035_11570 | Not Available | Positive | 2681262 - 2681909 | 24750.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

