Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_11470 | Not Available | Negative | 2661240 - 2661797 | 20068.5 |
| hypothetical protein | DW035_11480 | Not Available | Positive | 2663355 - 2663534 | 6629.28 |
| hypothetical protein | DW035_11485 | Not Available | Negative | 2663696 - 2663878 | 7096.45 |
| hypothetical protein | DW035_11490 | Not Available | Positive | 2664359 - 2665612 | 49801.9 |
| hypothetical protein | DW035_11495 | Not Available | Positive | 2665705 - 2665989 | 10626.0 |
| duf3732 domain-containing protein | DW035_11500 | Not Available | Positive | 2665986 - 2667896 | 74899.0 |
| hypothetical protein | DW035_11505 | Not Available | Positive | 2667893 - 2668924 | 39468.9 |
| hypothetical protein | DW035_11510 | Not Available | Negative | 2669300 - 2669887 | 22722.1 |
| hypothetical protein | DW035_11515 | Not Available | Negative | 2669862 - 2670740 | 33270.3 |
| mobilization protein | DW035_11520 | Not Available | Negative | 2671075 - 2672448 | 52676.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

