Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orotate phosphoribosyltransferase | DW035_11365 | Not Available | Positive | 2646081 - 2646716 | 23330.3 |
| srpbcc family protein | DW035_11370 | Not Available | Positive | 2646845 - 2647273 | 16384.2 |
| argininosuccinate lyase | DW035_11375 | Not Available | Positive | 2647314 - 2648654 | 50611.3 |
| Trna-gly | Not Available | Not Available | Positive | 2648731 - 2648803 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2648820 - 2648904 | Not Available |
| j domain-containing protein | DW035_11390 | Not Available | Negative | 2649286 - 2650215 | 34877.7 |
| hsp20/alpha crystallin family protein | DW035_11395 | Not Available | Negative | 2650300 - 2650731 | 16813.8 |
| hypothetical protein | DW035_11405 | Not Available | Positive | 2651524 - 2651769 | 8930.14 |
| hypothetical protein | DW035_11410 | Not Available | Positive | 2651790 - 2652077 | 10626.7 |
| anaerobic sulfatase-maturation protein | DW035_11415 | Not Available | Negative | 2652002 - 2653228 | 47359.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

