Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase | DW035_00955 | Not Available | Positive | 259116 - 259997 | 33874.7 |
| ribosome-associated translation inhibitor raia | DW035_00960 | Not Available | Positive | 260014 - 260313 | 11250.7 |
| Trna-thr | Not Available | Not Available | Positive | 260407 - 260483 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 260515 - 260597 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 260606 - 260678 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 260690 - 260761 | Not Available |
| elongation factor tu | DW035_00985 | Not Available | Positive | 260812 - 261996 | 43601.6 |
| Trna-trp | Not Available | Not Available | Positive | 262053 - 262128 | Not Available |
| preprotein translocase subunit sece | DW035_00995 | Not Available | Positive | 262142 - 262336 | 7315.92 |
| transcription termination/antitermination factor nusg | DW035_01000 | Not Available | Positive | 262353 - 262895 | 20122.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

