Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l16 | DW035_11105 | Not Available | Positive | 2587933 - 2588364 | 16020.6 |
| 50s ribosomal protein l29 | DW035_11110 | Not Available | Positive | 2588370 - 2588564 | 7515.23 |
| 30s ribosomal protein s17 | DW035_11115 | Not Available | Positive | 2588576 - 2588833 | 10042.3 |
| 50s ribosomal protein l14 | DW035_11120 | Not Available | Positive | 2588836 - 2589201 | 13087.1 |
| 50s ribosomal protein l24 | DW035_11125 | Not Available | Positive | 2589222 - 2589545 | 11668.2 |
| 50s ribosomal protein l5 | DW035_11130 | Not Available | Positive | 2589545 - 2590102 | 20847.8 |
| 30s ribosomal protein s14 | DW035_11135 | Not Available | Positive | 2590109 - 2590408 | 11133.8 |
| 30s ribosomal protein s8 | DW035_11140 | Not Available | Positive | 2590467 - 2590862 | 14584.0 |
| 50s ribosomal protein l6 | DW035_11145 | Not Available | Positive | 2590880 - 2591449 | 20883.6 |
| 50s ribosomal protein l18 | DW035_11150 | Not Available | Positive | 2591471 - 2591812 | 12601.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

