Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s7 | DW035_11055 | Not Available | Positive | 2581003 - 2581479 | 18135.0 |
| elongation factor g | DW035_11060 | Not Available | Positive | 2581509 - 2583626 | 77818.1 |
| 30s ribosomal protein s10 | DW035_11065 | Not Available | Positive | 2583721 - 2584026 | 11419.0 |
| 50s ribosomal protein l3 | DW035_11070 | Not Available | Positive | 2584047 - 2584664 | 21930.8 |
| 50s ribosomal protein l4 | DW035_11075 | Not Available | Positive | 2584664 - 2585293 | 22956.8 |
| 50s ribosomal protein l23 | DW035_11080 | Not Available | Positive | 2585314 - 2585604 | 10968.5 |
| 50s ribosomal protein l2 | DW035_11085 | Not Available | Positive | 2585612 - 2586433 | 29659.0 |
| 30s ribosomal protein s19 | DW035_11090 | Not Available | Positive | 2586459 - 2586728 | 9883.13 |
| 50s ribosomal protein l22 | DW035_11095 | Not Available | Positive | 2586767 - 2587174 | 15425.9 |
| 30s ribosomal protein s3 | DW035_11100 | Not Available | Positive | 2587181 - 2587912 | 27214.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

