Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease | DW035_10850 | Not Available | Positive | 2533551 - 2534519 | 35444.7 |
| arsenate reductase arsc | DW035_10855 | Not Available | Positive | 2534538 - 2535047 | 18621.2 |
| isoleucine--trna ligase | DW035_10860 | Not Available | Positive | 2535130 - 2538618 | 132152.0 |
| trar/dksa family transcriptional regulator | DW035_10865 | Not Available | Positive | 2538682 - 2539062 | 14347.1 |
| lipoprotein signal peptidase | DW035_10870 | Not Available | Positive | 2539183 - 2539821 | 24264.9 |
| duf4296 domain-containing protein | DW035_10875 | Not Available | Positive | 2539818 - 2540678 | 32965.4 |
| hypothetical protein | DW035_10880 | Not Available | Positive | 2540684 - 2541010 | 12594.1 |
| rna methyltransferase | DW035_10885 | Not Available | Negative | 2541005 - 2541763 | 28024.9 |
| hypothetical protein | DW035_10890 | Not Available | Positive | 2541868 - 2544177 | 89347.2 |
| hypothetical protein | DW035_10895 | Not Available | Positive | 2544194 - 2544430 | 9334.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

