Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination/antitermination protein nusa | DW035_00905 | Not Available | Positive | 247041 - 248300 | 47664.9 |
| translation initiation factor if-2 | DW035_00910 | Not Available | Positive | 248403 - 251324 | 107982.0 |
| cvpa family protein | DW035_00915 | Not Available | Positive | 251458 - 251976 | 18365.2 |
| fe-s cluster assembly protein sufb | DW035_00920 | Not Available | Positive | 251978 - 253429 | 53865.8 |
| fe-s cluster assembly atpase sufc | DW035_00925 | Not Available | Positive | 253449 - 254201 | 27718.7 |
| fe-s cluster assembly protein sufd | DW035_00930 | Not Available | Positive | 254204 - 255547 | 50596.4 |
| cysteine desulfurase | DW035_00935 | Not Available | Positive | 255568 - 256788 | 45042.2 |
| aminopeptidase p family protein | DW035_00940 | Not Available | Negative | 256870 - 258651 | 67034.8 |
| hypothetical protein | DW035_00945 | Not Available | Negative | 258673 - 258852 | 7107.17 |
| 30s ribosomal protein s21 | DW035_00950 | Not Available | Positive | 258851 - 259042 | 7566.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

