Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DW035_10695 | Not Available | Positive | 2503476 - 2504651 | 42600.5 |
| duf3843 family protein | DW035_10700 | Not Available | Positive | 2504669 - 2505838 | 45247.2 |
| galactokinase | DW035_10705 | Not Available | Negative | 2505912 - 2507066 | 42941.9 |
| mfs transporter | DW035_10710 | Not Available | Negative | 2507153 - 2508436 | 44429.8 |
| galactose mutarotase | DW035_10715 | Not Available | Negative | 2508486 - 2509580 | 40182.1 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | DW035_10720 | Not Available | Negative | 2509675 - 2510961 | 47901.0 |
| hypothetical protein | DW035_10725 | Not Available | Negative | 2511034 - 2511690 | 24227.2 |
| hypothetical protein | DW035_10730 | Not Available | Positive | 2511680 - 2511913 | 9211.71 |
| molecular chaperone dnaj | DW035_10735 | Not Available | Negative | 2511963 - 2513147 | 42520.6 |
| nucleotide exchange factor grpe | DW035_10740 | Not Available | Negative | 2513163 - 2513768 | 22830.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

