Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 2483286 - 2483369 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2483398 - 2483484 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2483490 - 2483562 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2483630 - 2483713 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2483720 - 2483795 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2483813 - 2483885 | Not Available |
| hypothetical protein | DW035_10615 | Not Available | Positive | 2484019 - 2484234 | 7669.92 |
| riboflavin synthase | DW035_10620 | Not Available | Positive | 2484265 - 2484870 | 22429.8 |
| yihy/virulence factor brkb family protein | DW035_10625 | Not Available | Negative | 2484943 - 2486259 | 49725.9 |
| pdz domain-containing protein | DW035_10635 | Not Available | Positive | 2486949 - 2488445 | 53349.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

