Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| valine--trna ligase | DW035_10530 | Not Available | Negative | 2468278 - 2470956 | 101720.0 |
| dinitrogenase iron-molybdenum cofactor biosynthesis protein | DW035_10535 | Not Available | Positive | 2471129 - 2471506 | 13245.8 |
| metallophosphoesterase | DW035_10540 | Not Available | Positive | 2471773 - 2473446 | 63945.9 |
| hypothetical protein | DW035_10550 | Not Available | Positive | 2475856 - 2476410 | 21419.8 |
| nucleoside triphosphate pyrophosphohydrolase | DW035_10555 | Not Available | Positive | 2476460 - 2477248 | 30424.3 |
| act domain-containing protein | DW035_10560 | Not Available | Positive | 2477392 - 2477664 | 10137.6 |
| pfl family protein | DW035_10565 | Not Available | Positive | 2477682 - 2479046 | 47686.1 |
| atp-dependent dna helicase | DW035_10570 | Not Available | Positive | 2479259 - 2481613 | 89544.5 |
| carboxynorspermidine decarboxylase | DW035_10575 | Not Available | Positive | 2481629 - 2482792 | 44686.2 |
| Trna-gly | Not Available | Not Available | Positive | 2483178 - 2483250 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

