Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_10480 | Not Available | Negative | 2457811 - 2458170 | 14338.9 |
| sigma-70 family rna polymerase sigma factor | DW035_10485 | Not Available | Negative | 2458174 - 2458719 | 21271.2 |
| hypothetical protein | DW035_10490 | Not Available | Positive | 2458851 - 2459252 | 14816.6 |
| hypothetical protein | DW035_10495 | Not Available | Positive | 2459443 - 2459859 | 16552.6 |
| abc transporter permease | DW035_10500 | Not Available | Negative | 2460063 - 2462447 | 90096.3 |
| abc transporter permease | DW035_10505 | Not Available | Negative | 2462481 - 2464829 | 89486.1 |
| sigma-70 family rna polymerase sigma factor | DW035_10510 | Not Available | Positive | 2465857 - 2466363 | 19809.9 |
| hypothetical protein | DW035_10515 | Not Available | Positive | 2466360 - 2466827 | 18083.3 |
| hypothetical protein | DW035_10520 | Not Available | Positive | 2466840 - 2467286 | 17284.1 |
| hypothetical protein | DW035_10525 | Not Available | Positive | 2467315 - 2468202 | 33350.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

