Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DW035_10430 | Not Available | Negative | 2446130 - 2446954 | 31165.6 |
| dmt family transporter | DW035_10435 | Not Available | Positive | 2447073 - 2448002 | 33590.1 |
| helicase | DW035_10440 | Not Available | Positive | 2447995 - 2449887 | 72514.4 |
| transporter | DW035_10445 | Not Available | Positive | 2449965 - 2451563 | 56683.0 |
| dihydrolipoamide acyltransferase | DW035_10450 | Not Available | Negative | 2451847 - 2452215 | 12900.4 |
| mechanosensitive ion channel family protein | DW035_10455 | Not Available | Negative | 2452222 - 2453436 | 45907.6 |
| tlpa family protein disulfide reductase | DW035_10460 | Not Available | Positive | 2453521 - 2454099 | 21871.7 |
| electron transfer flavoprotein beta subunit/fixa family protein | DW035_10465 | Not Available | Positive | 2454119 - 2455006 | 31577.9 |
| electron transfer flavoprotein subunit alpha/fixb family protein | DW035_10470 | Not Available | Positive | 2455012 - 2456031 | 37023.6 |
| acyl-coa dehydrogenase | DW035_10475 | Not Available | Positive | 2456031 - 2457737 | 64000.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

