Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate kinase | DW035_00840 | Not Available | Positive | 234955 - 236415 | 54092.3 |
| methyltransferase | DW035_00845 | Not Available | Positive | 236418 - 237056 | 24616.7 |
| 30s ribosome-binding factor rbfa | DW035_00850 | Not Available | Positive | 237067 - 237402 | 12885.9 |
| abc transporter permease | DW035_00855 | Not Available | Positive | 237503 - 238732 | 45678.0 |
| group ii intron reverse transcriptase/maturase | DW035_00870 | Not Available | Positive | 241305 - 242960 | 63468.2 |
| hypothetical protein | DW035_00880 | Not Available | Negative | 244723 - 245097 | 14539.2 |
| hypothetical protein | DW035_00885 | Not Available | Negative | 245101 - 245853 | 28853.2 |
| Trna-phe | Not Available | Not Available | Positive | 246087 - 246159 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 246324 - 246396 | Not Available |
| ribosome assembly cofactor rimp | DW035_00900 | Not Available | Positive | 246571 - 247038 | 17777.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

