Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylserine decarboxylase family protein | DW035_10200 | Not Available | Negative | 2385761 - 2386447 | 25918.9 |
| hypothetical protein | DW035_10210 | Not Available | Negative | 2388395 - 2388598 | 7534.05 |
| duf4831 family protein | DW035_10220 | Not Available | Negative | 2389920 - 2390960 | 38417.9 |
| nad(p)h-hydrate dehydratase | DW035_10225 | Not Available | Negative | 2390969 - 2392486 | 54798.9 |
| hypoxanthine phosphoribosyltransferase | DW035_10230 | Not Available | Positive | 2392644 - 2393180 | 20047.4 |
| adenylate kinase | DW035_10235 | Not Available | Positive | 2393205 - 2393774 | 20777.1 |
| gtpase obge | DW035_10240 | Not Available | Positive | 2393830 - 2395014 | 44341.5 |
| peptidoglycan editing factor pgef | DW035_10245 | Not Available | Positive | 2395014 - 2395814 | 29951.0 |
| hypothetical protein | DW035_10250 | Not Available | Positive | 2395843 - 2396505 | 24618.3 |
| m23 family peptidase | DW035_10255 | Not Available | Positive | 2396507 - 2397124 | 22320.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

