Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome recycling factor | DW035_10150 | Not Available | Negative | 2379380 - 2379940 | 20740.1 |
| histidine phosphatase family protein | DW035_10155 | Not Available | Positive | 2380115 - 2380639 | 19575.5 |
| ump kinase | DW035_10160 | Not Available | Negative | 2380705 - 2381415 | 25493.2 |
| mate family efflux transporter | DW035_10165 | Not Available | Negative | 2381480 - 2382802 | 48979.1 |
| biotin--[acetyl-coa-carboxylase] ligase | DW035_10170 | Not Available | Negative | 2382799 - 2383536 | 28144.2 |
| endonuclease | DW035_10175 | Not Available | Negative | 2383556 - 2383924 | 14006.7 |
| hypothetical protein | DW035_10180 | Not Available | Positive | 2383998 - 2384231 | 9451.57 |
| nucleoside deaminase | DW035_10185 | Not Available | Positive | 2384235 - 2384669 | 15717.0 |
| duf4834 family protein | DW035_10190 | Not Available | Negative | 2384674 - 2384961 | 11071.4 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | DW035_10195 | Not Available | Negative | 2385016 - 2385720 | 26041.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

