Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'(2'),5'-bisphosphate nucleotidase | DW035_10100 | Not Available | Negative | 2363770 - 2364579 | 30095.6 |
| amino acid permease | DW035_10105 | Not Available | Negative | 2364675 - 2366339 | 60143.1 |
| tolc family protein | DW035_10110 | Not Available | Negative | 2366393 - 2367715 | 50497.6 |
| acrb/acrd/acrf family protein | DW035_10115 | Not Available | Negative | 2367712 - 2370744 | 112300.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW035_10120 | Not Available | Negative | 2370756 - 2371832 | 39412.7 |
| hypothetical protein | DW035_10125 | Not Available | Positive | 2372123 - 2372449 | 12635.4 |
| efflux rnd transporter periplasmic adaptor subunit | DW035_10130 | Not Available | Positive | 2372564 - 2373712 | 43861.8 |
| acrb/acrd/acrf family protein | DW035_10135 | Not Available | Positive | 2373719 - 2376859 | 115330.0 |
| tolc family protein | DW035_10140 | Not Available | Positive | 2376849 - 2378291 | 53912.9 |
| ribosome small subunit-dependent gtpase a | DW035_10145 | Not Available | Negative | 2378367 - 2379344 | 36559.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

