Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_09795 | Not Available | Positive | 2298401 - 2299372 | 38156.4 |
| hypothetical protein | DW035_09800 | Not Available | Negative | 2299657 - 2300031 | 14076.2 |
| smi1/knr4 family protein | DW035_09805 | Not Available | Negative | 2300153 - 2300740 | 22595.0 |
| haloacid dehalogenase | DW035_09810 | Not Available | Negative | 2301135 - 2302241 | 42520.5 |
| molecular chaperone dnak | DW035_09815 | Not Available | Negative | 2302337 - 2304253 | 68141.9 |
| pspc domain-containing protein | DW035_09820 | Not Available | Negative | 2304444 - 2305523 | 39734.1 |
| padr family transcriptional regulator | DW035_09825 | Not Available | Negative | 2305536 - 2305865 | 12601.2 |
| gnat family n-acetyltransferase | DW035_09830 | Not Available | Positive | 2306033 - 2306530 | 19597.7 |
| lysine exporter lyso family protein | DW035_09835 | Not Available | Negative | 2306581 - 2307213 | 22676.6 |
| duf340 domain-containing protein | DW035_09840 | Not Available | Negative | 2307210 - 2307488 | 9809.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

