Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated protein glde | DW035_09575 | Not Available | Negative | 2252224 - 2253585 | 51578.3 |
| single-stranded dna-binding protein | DW035_09580 | Not Available | Negative | 2253629 - 2254054 | 15543.3 |
| a/g-specific adenine glycosylase | DW035_09585 | Not Available | Negative | 2254059 - 2255123 | 40959.3 |
| integration host factor subunit beta | DW035_09590 | Not Available | Positive | 2255331 - 2255606 | 10026.3 |
| ribonuclease e/g | DW035_09595 | Not Available | Positive | 2255851 - 2257425 | 59910.0 |
| peptidase | DW035_09600 | Not Available | Positive | 2257802 - 2259400 | 60216.1 |
| aminopeptidase | DW035_09605 | Not Available | Positive | 2259441 - 2260628 | 45292.5 |
| transcriptional repressor | DW035_09610 | Not Available | Positive | 2260709 - 2261137 | 16181.2 |
| yqae/pmp3 family membrane protein | DW035_09615 | Not Available | Positive | 2261743 - 2261898 | 5462.19 |
| hypothetical protein | DW035_09620 | Not Available | Positive | 2261930 - 2262589 | 25458.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

