Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor histidine kinase | DW035_09525 | Not Available | Positive | 2240250 - 2242037 | 69011.0 |
| hypothetical protein | DW035_09530 | Not Available | Negative | 2242191 - 2242985 | 31477.4 |
| hypothetical protein | DW035_09535 | Not Available | Negative | 2243019 - 2244077 | 41104.0 |
| peptidase s51 | DW035_09540 | Not Available | Negative | 2244418 - 2245044 | 23462.7 |
| hypothetical protein | DW035_09545 | Not Available | Positive | 2245337 - 2245582 | 9228.85 |
| hypothetical protein | DW035_09550 | Not Available | Negative | 2245868 - 2246065 | 7949.91 |
| hypothetical protein | DW035_09555 | Not Available | Negative | 2246181 - 2246684 | 19805.0 |
| mfs transporter | DW035_09560 | Not Available | Negative | 2246921 - 2248438 | 55097.3 |
| asma family protein | DW035_09565 | Not Available | Negative | 2248540 - 2251536 | 111502.0 |
| hypothetical protein | DW035_09570 | Not Available | Negative | 2251559 - 2252221 | 25474.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

