Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease muts2 | DW035_09260 | Not Available | Negative | 2198033 - 2200534 | 94830.1 |
| Trna-ser | Not Available | Not Available | Positive | 2200681 - 2200768 | Not Available |
| 4-oxalocrotonate tautomerase family protein | DW035_09270 | Not Available | Negative | 2201069 - 2201269 | 7352.83 |
| nuclear transport factor 2 family protein | DW035_09275 | Not Available | Negative | 2201299 - 2201652 | 13303.0 |
| gnat family n-acetyltransferase | DW035_09280 | Not Available | Negative | 2201667 - 2202521 | 31777.2 |
| flavodoxin family protein | DW035_09285 | Not Available | Negative | 2202553 - 2203119 | 20318.9 |
| gnat family n-acetyltransferase | DW035_09290 | Not Available | Negative | 2203116 - 2203628 | 19422.1 |
| gtp cyclohydrolase | DW035_09295 | Not Available | Negative | 2203631 - 2203918 | 10804.1 |
| mobilization protein | DW035_09310 | Not Available | Negative | 2204498 - 2205901 | 54345.1 |
| dna primase | DW035_09315 | Not Available | Negative | 2206108 - 2207064 | 37059.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

