Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrillin family protein | DW035_09210 | Not Available | Positive | 2189451 - 2190386 | 32470.0 |
| sdr family nad(p)-dependent oxidoreductase | DW035_09215 | Not Available | Positive | 2190567 - 2191361 | 28597.7 |
| arac family transcriptional regulator | DW035_09220 | Not Available | Negative | 2191331 - 2192236 | 34540.4 |
| cytidylate kinase family protein | DW035_09225 | Not Available | Positive | 2192362 - 2193660 | 48946.4 |
| class a beta-lactamase, subclass a2 | DW035_09230 | Not Available | Negative | 2193639 - 2194532 | 33590.0 |
| 50s ribosomal protein l27 | DW035_09235 | Not Available | Negative | 2194649 - 2194912 | 9148.99 |
| 50s ribosomal protein l21 | DW035_09240 | Not Available | Negative | 2194934 - 2195251 | 11699.2 |
| had family hydrolase | DW035_09245 | Not Available | Negative | 2195400 - 2196044 | 23935.8 |
| methylated-dna--[protein]-cysteine s-methyltransferase | DW035_09250 | Not Available | Negative | 2196063 - 2196557 | 18134.7 |
| l-serine ammonia-lyase | DW035_09255 | Not Available | Negative | 2196753 - 2197961 | 43759.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

