Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | DW035_09160 | Not Available | Negative | 2176554 - 2177936 | 51468.2 |
| multidrug efflux rnd transporter permease subunit | DW035_09165 | Not Available | Negative | 2177955 - 2181059 | 113032.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW035_09170 | Not Available | Negative | 2181083 - 2182279 | 44782.1 |
| nitrous oxide-stimulated promoter family protein | DW035_09175 | Not Available | Negative | 2182459 - 2182764 | 12500.5 |
| threonine/serine exporter family protein | DW035_09180 | Not Available | Positive | 2182850 - 2184235 | 51414.8 |
| antibiotic biosynthesis monooxygenase | DW035_09185 | Not Available | Negative | 2184367 - 2184642 | 10432.6 |
| 30s ribosomal protein s1 | DW035_09190 | Not Available | Negative | 2184741 - 2186525 | 66546.6 |
| simpl domain-containing protein | DW035_09195 | Not Available | Negative | 2186724 - 2187428 | 26250.4 |
| atpase | DW035_09200 | Not Available | Negative | 2187623 - 2188477 | 31697.2 |
| peptidylprolyl isomerase | DW035_09205 | Not Available | Negative | 2188562 - 2189152 | 21499.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

