Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | DW035_09110 | Not Available | Negative | 2158640 - 2162620 | 152423.0 |
| phosphoglycerate kinase | DW035_09115 | Not Available | Negative | 2162763 - 2164019 | 44326.8 |
| penicillin-binding protein | DW035_09120 | Not Available | Negative | 2164308 - 2166728 | 91460.7 |
| nad(+) diphosphatase | DW035_09125 | Not Available | Negative | 2166707 - 2167504 | 29894.0 |
| rna-binding transcriptional accessory protein | DW035_09130 | Not Available | Negative | 2167519 - 2169657 | 80214.6 |
| bifunctional metallophosphatase/5'-nucleotidase | DW035_09135 | Not Available | Positive | 2169817 - 2171571 | 66207.4 |
| hypothetical protein | DW035_09140 | Not Available | Negative | 2171680 - 2171958 | 10597.6 |
| tonb-dependent receptor | DW035_09145 | Not Available | Positive | 2171984 - 2174290 | 86027.6 |
| peptidase m64 | DW035_09150 | Not Available | Positive | 2174645 - 2175931 | 48604.6 |
| gnat family n-acetyltransferase | DW035_09155 | Not Available | Positive | 2175953 - 2176489 | 20795.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

