Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DW035_09060 | Not Available | Positive | 2148922 - 2150895 | 74471.7 |
| hypothetical protein | DW035_09065 | Not Available | Positive | 2150911 - 2152002 | 39912.1 |
| abc transporter substrate-binding protein | DW035_09070 | Not Available | Positive | 2152008 - 2153144 | 42559.0 |
| iron abc transporter permease | DW035_09075 | Not Available | Positive | 2153141 - 2154181 | 36271.8 |
| abc transporter atp-binding protein | DW035_09080 | Not Available | Positive | 2154181 - 2155194 | 37371.2 |
| hypothetical protein | DW035_09085 | Not Available | Positive | 2155270 - 2155677 | 15844.8 |
| duf3440 domain-containing protein | DW035_09090 | Not Available | Positive | 2155664 - 2156962 | 51840.4 |
| chromosome partitioning protein parb | DW035_09095 | Not Available | Positive | 2156959 - 2157495 | 20356.6 |
| chromate transporter | DW035_09100 | Not Available | Negative | 2157504 - 2158073 | 20573.7 |
| chromate transporter | DW035_09105 | Not Available | Negative | 2158087 - 2158629 | 20512.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

