Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_09010 | Not Available | Positive | 2135889 - 2136713 | 30541.6 |
| duf1282 domain-containing protein | DW035_09015 | Not Available | Positive | 2137090 - 2137659 | 21560.7 |
| ssra-binding protein | DW035_09020 | Not Available | Positive | 2137659 - 2138117 | 17983.9 |
| methionine synthase | DW035_09025 | Not Available | Positive | 2138142 - 2140904 | 101412.0 |
| uracil-dna glycosylase | DW035_09030 | Not Available | Positive | 2140923 - 2141585 | 24933.7 |
| aspartate--ammonia ligase | DW035_09035 | Not Available | Negative | 2141685 - 2142725 | 39736.2 |
| dtdp-glucose 4,6-dehydratase | DW035_09040 | Not Available | Negative | 2142933 - 2144072 | 43679.8 |
| metallophosphoesterase | DW035_09045 | Not Available | Negative | 2144136 - 2144627 | 18831.6 |
| rna degradosome polyphosphate kinase | DW035_09050 | Not Available | Positive | 2144691 - 2146748 | 80555.5 |
| potassium/proton antiporter | DW035_09055 | Not Available | Negative | 2146745 - 2148205 | 53686.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

