Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein | DW035_08960 | Not Available | Negative | 2125895 - 2126341 | 16930.5 |
| duf3871 family protein | DW035_08965 | Not Available | Negative | 2126425 - 2127417 | 37411.8 |
| hypothetical protein | DW035_08970 | Not Available | Negative | 2127751 - 2129361 | 61783.6 |
| hypothetical protein | DW035_08975 | Not Available | Negative | 2129526 - 2130443 | 34702.7 |
| hypothetical protein | DW035_08980 | Not Available | Positive | 2130489 - 2130773 | 10938.5 |
| hypothetical protein | DW035_08985 | Not Available | Negative | 2130721 - 2131563 | 32471.0 |
| site-specific integrase | DW035_08990 | Not Available | Negative | 2131645 - 2132862 | 46899.1 |
| gggtgrt protein | DW035_08995 | Not Available | Negative | 2133229 - 2134239 | 35895.1 |
| hypothetical protein | DW035_09000 | Not Available | Negative | 2134260 - 2134961 | 25226.4 |
| duf4375 domain-containing protein | DW035_09005 | Not Available | Positive | 2135253 - 2135762 | 19789.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

