Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa epimerase | DW035_08890 | Not Available | Positive | 2113355 - 2113759 | 14526.6 |
| acyl-coa carboxylase subunit beta | DW035_08895 | Not Available | Positive | 2113809 - 2115362 | 56395.9 |
| lamin tail domain-containing protein | DW035_08900 | Not Available | Positive | 2115388 - 2116317 | 34390.1 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | DW035_08905 | Not Available | Positive | 2116340 - 2116768 | 15265.7 |
| sodium ion-translocating decarboxylase subunit beta | DW035_08910 | Not Available | Positive | 2116771 - 2117931 | 40907.3 |
| hypothetical protein | DW035_08930 | Not Available | Negative | 2122067 - 2122492 | 16433.1 |
| hypothetical protein | DW035_08935 | Not Available | Negative | 2122532 - 2123188 | 24773.6 |
| hypothetical protein | DW035_08940 | Not Available | Negative | 2123216 - 2123899 | 26004.3 |
| hypothetical protein | DW035_08945 | Not Available | Negative | 2123936 - 2124265 | 12559.2 |
| hypothetical protein | DW035_08950 | Not Available | Negative | 2124277 - 2124594 | 11516.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

