Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DW035_08740 | Not Available | Negative | 2084654 - 2085082 | 16770.2 |
| rtec protein | DW035_08745 | Not Available | Negative | 2085312 - 2086148 | 32213.6 |
| arac family transcriptional regulator | DW035_08750 | Not Available | Negative | 2086296 - 2087141 | 32767.8 |
| hypothetical protein | DW035_08755 | Not Available | Negative | 2087364 - 2087882 | 20408.9 |
| hypothetical protein | DW035_08760 | Not Available | Negative | 2087913 - 2088215 | 11409.0 |
| wg repeat-containing protein | DW035_08765 | Not Available | Positive | 2088346 - 2089101 | 29716.7 |
| sigma-70 family rna polymerase sigma factor | DW035_08770 | Not Available | Positive | 2089743 - 2090285 | 20584.7 |
| port family protein | DW035_08775 | Not Available | Positive | 2090289 - 2091581 | 48186.6 |
| ribulose-phosphate 3-epimerase | DW035_08780 | Not Available | Positive | 2091654 - 2092310 | 24056.6 |
| comec family competence protein | DW035_08785 | Not Available | Positive | 2092314 - 2094287 | 74630.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

