Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine-nucleoside phosphorylase | DW035_00690 | Not Available | Negative | 196700 - 197509 | 29756.1 |
| tetraacyldisaccharide 4'-kinase | DW035_00695 | Not Available | Negative | 197466 - 198566 | 41607.8 |
| signal peptide peptidase sppa | DW035_00700 | Not Available | Negative | 198582 - 200342 | 65037.0 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | DW035_00705 | Not Available | Positive | 200840 - 202687 | 66565.2 |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | DW035_00710 | Not Available | Positive | 202721 - 203731 | 36696.7 |
| uracil phosphoribosyltransferase | DW035_00715 | Not Available | Negative | 203791 - 204444 | 24334.1 |
| phosphoenolpyruvate carboxykinase (atp) | DW035_00720 | Not Available | Positive | 204725 - 206329 | 59041.1 |
| glycoside hydrolase family 29 | DW035_00725 | Not Available | Positive | 206499 - 208313 | 68557.8 |
| proton-conducting membrane transporter | DW035_00730 | Not Available | Positive | 208334 - 208981 | 23867.0 |
| alkaline phosphatase family protein | DW035_00735 | Not Available | Negative | 208987 - 210807 | 68409.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

