Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii pantothenate kinase | DW035_08690 | Not Available | Negative | 2072189 - 2072914 | 26814.8 |
| duf4105 domain-containing protein | DW035_08695 | Not Available | Positive | 2073096 - 2074304 | 46725.0 |
| alkaline phosphatase family protein | DW035_08700 | Not Available | Positive | 2074304 - 2075887 | 59885.5 |
| preprotein translocase subunit seca | DW035_08705 | Not Available | Positive | 2075977 - 2079273 | 125229.0 |
| tetratricopeptide repeat protein | DW035_08710 | Not Available | Positive | 2079418 - 2080407 | 36454.4 |
| hypothetical protein | DW035_08715 | Not Available | Positive | 2080467 - 2080916 | 17008.0 |
| hypothetical protein | DW035_08720 | Not Available | Positive | 2080928 - 2081926 | 38249.1 |
| hypothetical protein | DW035_08725 | Not Available | Negative | 2082036 - 2082225 | 6966.64 |
| dna-binding protein | DW035_08730 | Not Available | Negative | 2082258 - 2082617 | 14545.6 |
| bifunctional dna primase/helicase | DW035_08735 | Not Available | Negative | 2082592 - 2084691 | 78079.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

