Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase type iii | DW035_08640 | Not Available | Negative | 2058863 - 2061052 | 82539.3 |
| ammonium transporter | DW035_08645 | Not Available | Negative | 2061104 - 2062498 | 49410.7 |
| p-ii family nitrogen regulator | DW035_08650 | Not Available | Negative | 2062544 - 2062900 | 13587.5 |
| hypothetical protein | DW035_08655 | Not Available | Negative | 2063009 - 2063710 | 25125.2 |
| hypothetical protein | DW035_08660 | Not Available | Positive | 2064075 - 2065295 | 46201.8 |
| peptidylprolyl isomerase | DW035_08665 | Not Available | Negative | 2065397 - 2067535 | 79204.8 |
| hlyc/corc family transporter | DW035_08670 | Not Available | Negative | 2067638 - 2068891 | 47345.6 |
| lps export abc transporter periplasmic protein lptc | DW035_08675 | Not Available | Negative | 2068902 - 2069522 | 23805.3 |
| hypothetical protein | DW035_08680 | Not Available | Negative | 2069527 - 2070888 | 50305.8 |
| hypothetical protein | DW035_08685 | Not Available | Negative | 2070928 - 2072199 | 47157.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

