Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_08585 | Not Available | Positive | 2048840 - 2049376 | 20549.1 |
| hypothetical protein | DW035_08590 | Not Available | Positive | 2049363 - 2049752 | 14445.3 |
| duf3795 domain-containing protein | DW035_08595 | Not Available | Positive | 2049756 - 2050304 | 21144.3 |
| n-acetyltransferase | DW035_08600 | Not Available | Positive | 2050317 - 2050862 | 20706.7 |
| gnat family n-acetyltransferase | DW035_08605 | Not Available | Positive | 2050867 - 2052414 | 58897.1 |
| chloramphenicol acetyltransferase | DW035_08610 | Not Available | Negative | 2052436 - 2053056 | 23584.8 |
| arac family transcriptional regulator | DW035_08615 | Not Available | Negative | 2053128 - 2053946 | 31725.2 |
| thymidylate synthase | DW035_08620 | Not Available | Positive | 2054075 - 2054641 | 22262.8 |
| mate family efflux transporter | DW035_08625 | Not Available | Positive | 2054905 - 2056194 | 48317.4 |
| bspa family leucine-rich repeat surface protein | DW035_08630 | Not Available | Negative | 2056365 - 2057612 | 48202.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

