Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1593 domain-containing protein | DW035_08385 | Not Available | Positive | 1981951 - 1983306 | 50684.6 |
| glycoside hydrolase family 43 protein | DW035_08390 | Not Available | Negative | 1983395 - 1985107 | 63027.4 |
| esterase family protein | DW035_08395 | Not Available | Positive | 1985459 - 1986328 | 33054.5 |
| glycoside hydrolase family 95 protein | DW035_08400 | Not Available | Positive | 1986350 - 1988800 | 91649.1 |
| glycoside hydrolase | DW035_08405 | Not Available | Positive | 1988840 - 1990447 | 60737.3 |
| hypothetical protein | DW035_08410 | Not Available | Positive | 1990486 - 1992876 | 90621.6 |
| glycoside hydrolase family 97 protein | DW035_08415 | Not Available | Positive | 1992946 - 1994913 | 72751.8 |
| carbohydrate-binding protein | DW035_08420 | Not Available | Positive | 1994929 - 1996317 | 51818.1 |
| carbohydrate-binding protein | DW035_08425 | Not Available | Positive | 1996376 - 1997701 | 50293.1 |
| carbohydrate-binding protein | DW035_08430 | Not Available | Positive | 1997797 - 1999134 | 50078.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

