Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DW035_00630 | Not Available | Positive | 189968 - 190723 | 29097.9 |
| hypothetical protein | DW035_00635 | Not Available | Negative | 190747 - 191169 | 16906.8 |
| duf3408 domain-containing protein | DW035_00645 | Not Available | Negative | 191449 - 191916 | 17990.4 |
| hypothetical protein | DW035_00650 | Not Available | Negative | 192220 - 192417 | 7372.0 |
| dna-binding protein | DW035_00655 | Not Available | Positive | 192483 - 192794 | 12257.8 |
| dna-binding protein | DW035_00660 | Not Available | Positive | 192848 - 193153 | 11975.2 |
| hypothetical protein | DW035_00670 | Not Available | Negative | 193501 - 193875 | 14238.5 |
| site-specific integrase | DW035_00675 | Not Available | Negative | 193878 - 195113 | 47741.5 |
| Trna-phe | Not Available | Not Available | Positive | 195359 - 195431 | Not Available |
| thiamine-phosphate kinase | DW035_00685 | Not Available | Negative | 195655 - 196692 | 37881.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

