Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3853 family protein | DW035_08185 | Not Available | Positive | 1934701 - 1935009 | 11297.9 |
| mobilization protein | DW035_08190 | Not Available | Positive | 1935021 - 1936078 | 40068.2 |
| dna primase | DW035_08195 | Not Available | Positive | 1936292 - 1936428 | 5162.41 |
| hypothetical protein | DW035_08200 | Not Available | Positive | 1936429 - 1936803 | 14356.5 |
| transposase | DW035_08205 | Not Available | Positive | 1936805 - 1937149 | 13517.5 |
| is66 family transposase | DW035_08210 | Not Available | Positive | 1937237 - 1939018 | 68509.4 |
| fic family protein | DW035_08215 | Not Available | Negative | 1939260 - 1940108 | 33077.5 |
| duf1349 domain-containing protein | DW035_08220 | Not Available | Negative | 1940239 - 1940892 | 25385.3 |
| helix-turn-helix transcriptional regulator | DW035_08225 | Not Available | Positive | 1940990 - 1941778 | 30526.9 |
| duf4091 domain-containing protein | DW035_08230 | Not Available | Positive | 1941909 - 1943687 | 67728.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

