Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | DW035_08120 | Not Available | Negative | 1919028 - 1919417 | 14351.6 |
| pyridine nucleotide-disulfide oxidoreductase | DW035_08125 | Not Available | Negative | 1919420 - 1921867 | 89216.0 |
| n-acetyltransferase | DW035_08130 | Not Available | Negative | 1921999 - 1922493 | 18975.7 |
| Trna-ala | Not Available | Not Available | Positive | 1922612 - 1922685 | Not Available |
| dna-binding response regulator | DW035_08140 | Not Available | Positive | 1922766 - 1923461 | 26526.2 |
| hamp domain-containing protein | DW035_08145 | Not Available | Positive | 1923458 - 1924828 | 52519.6 |
| hypothetical protein | DW035_08155 | Not Available | Positive | 1927332 - 1928372 | 39094.2 |
| beta-n-acetylhexosaminidase | DW035_08160 | Not Available | Negative | 1928379 - 1930445 | 78033.7 |
| duf1016 family protein | DW035_08175 | Not Available | Positive | 1932115 - 1933401 | 48679.1 |
| hypothetical protein | DW035_08180 | Not Available | Positive | 1933414 - 1934478 | 41983.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

