Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DW035_08070 | Not Available | Negative | 1908933 - 1912091 | 117323.0 |
| hypothetical protein | DW035_08075 | Not Available | Negative | 1912115 - 1913698 | 57928.3 |
| fimbrillin family protein | DW035_08080 | Not Available | Negative | 1913718 - 1914743 | 37670.6 |
| Trna-glu | Not Available | Not Available | Positive | 1915510 - 1915581 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 1915624 - 1915698 | Not Available |
| porin family protein | DW035_08095 | Not Available | Negative | 1915753 - 1916379 | 23301.9 |
| duf4136 domain-containing protein | DW035_08100 | Not Available | Negative | 1916398 - 1917021 | 23556.6 |
| duf4251 domain-containing protein | DW035_08105 | Not Available | Negative | 1917038 - 1917589 | 19670.8 |
| hypothetical protein | DW035_08110 | Not Available | Positive | 1917756 - 1918424 | 26194.5 |
| diacylglucosamine hydrolase | DW035_08115 | Not Available | Negative | 1918387 - 1919013 | 23864.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

