Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| port family protein | DW035_07920 | Not Available | Positive | 1871349 - 1872056 | 26779.0 |
| exodeoxyribonuclease iii | DW035_07925 | Not Available | Positive | 1872062 - 1872820 | 29541.9 |
| diacylglycerol kinase family protein | DW035_07930 | Not Available | Positive | 1872829 - 1873206 | 13439.7 |
| pap2 family protein | DW035_07935 | Not Available | Positive | 1873203 - 1873760 | 20151.4 |
| maoc family dehydratase | DW035_07940 | Not Available | Negative | 1873834 - 1874298 | 17750.6 |
| hypothetical protein | DW035_07945 | Not Available | Negative | 1874454 - 1874660 | 7811.56 |
| cation transporter | DW035_07950 | Not Available | Positive | 1874838 - 1875752 | 33121.5 |
| hypothetical protein | DW035_07955 | Not Available | Negative | 1875825 - 1876028 | 7601.3 |
| c_gcaxxg_c_c family protein | DW035_07960 | Not Available | Negative | 1876161 - 1876628 | 16990.5 |
| d-2-hydroxyacid dehydrogenase | DW035_07965 | Not Available | Negative | 1876643 - 1877602 | 34712.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

