Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acid phosphatase | DW035_07620 | Not Available | Negative | 1798716 - 1799660 | 36047.2 |
| hypothetical protein | DW035_07625 | Not Available | Negative | 1799850 - 1801277 | 50853.6 |
| tonb-dependent receptor | DW035_07630 | Not Available | Negative | 1801326 - 1803980 | 100092.0 |
| histidine-type phosphatase | DW035_07635 | Not Available | Negative | 1804145 - 1805431 | 49315.9 |
| transcription-repair coupling factor | DW035_07640 | Not Available | Negative | 1805565 - 1808933 | 127873.0 |
| hypothetical protein | DW035_07645 | Not Available | Negative | 1809018 - 1809389 | 13995.7 |
| hypothetical protein | DW035_07650 | Not Available | Negative | 1809597 - 1810514 | 35630.1 |
| hypothetical protein | DW035_07655 | Not Available | Negative | 1810493 - 1810765 | 10471.9 |
| hypothetical protein | DW035_07660 | Not Available | Negative | 1810806 - 1811321 | 19230.2 |
| hypothetical protein | DW035_07665 | Not Available | Negative | 1811391 - 1811618 | 8882.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

