Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_07570 | Not Available | Negative | 1786286 - 1788115 | 68562.1 |
| hypothetical protein | DW035_07575 | Not Available | Negative | 1788317 - 1788703 | 14564.0 |
| hypothetical protein | DW035_07580 | Not Available | Negative | 1789074 - 1790252 | 45871.6 |
| vwa domain-containing protein | DW035_07585 | Not Available | Negative | 1791074 - 1792354 | 50211.6 |
| atpase | DW035_07590 | Not Available | Negative | 1792371 - 1793999 | 61953.0 |
| eama family transporter | DW035_07595 | Not Available | Negative | 1793987 - 1794736 | 27646.3 |
| acyl-coa carboxylase subunit beta | DW035_07600 | Not Available | Negative | 1794847 - 1796379 | 55993.0 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | DW035_07605 | Not Available | Negative | 1796376 - 1796897 | 19158.0 |
| acetyl-coa carboxylase biotin carboxylase subunit | DW035_07610 | Not Available | Negative | 1796923 - 1798434 | 57264.8 |
| hypothetical protein | DW035_07615 | Not Available | Positive | 1798534 - 1798719 | 7209.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

