Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | DW035_07470 | Not Available | Negative | 1769166 - 1769918 | 27999.9 |
| protein batd | DW035_07475 | Not Available | Negative | 1769943 - 1771772 | 67012.1 |
| tetratricopeptide repeat protein | DW035_07480 | Not Available | Negative | 1771820 - 1772494 | 26196.8 |
| vwa domain-containing protein | DW035_07485 | Not Available | Negative | 1772530 - 1773549 | 37833.1 |
| vwa domain-containing protein | DW035_07490 | Not Available | Negative | 1773561 - 1774559 | 37246.8 |
| hypothetical protein | DW035_07495 | Not Available | Negative | 1774580 - 1775653 | 40538.0 |
| duf58 domain-containing protein | DW035_07500 | Not Available | Negative | 1775692 - 1776561 | 33716.3 |
| atpase | DW035_07505 | Not Available | Negative | 1776703 - 1777698 | 37171.3 |
| hypothetical protein | DW035_07510 | Not Available | Negative | 1777905 - 1779050 | 41875.8 |
| hu family dna-binding protein | DW035_07515 | Not Available | Negative | 1779043 - 1779333 | 10919.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

