Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease | DW035_07320 | Not Available | Positive | 1740265 - 1741455 | 45993.5 |
| hypothetical protein | DW035_07325 | Not Available | Positive | 1741498 - 1741764 | 10227.6 |
| nucleotidyltransferase | DW035_07330 | Not Available | Positive | 1741825 - 1742277 | 18178.7 |
| nucleotidyltransferase domain-containing protein | DW035_07335 | Not Available | Positive | 1742280 - 1742588 | 11800.4 |
| blai/meci/copy family transcriptional regulator | DW035_07340 | Not Available | Positive | 1742779 - 1743153 | 14466.2 |
| m56 family peptidase | DW035_07345 | Not Available | Positive | 1743167 - 1745062 | 70879.6 |
| altronate dehydratase | DW035_07350 | Not Available | Negative | 1745146 - 1746639 | 54409.9 |
| laci family dna-binding transcriptional regulator | DW035_07355 | Not Available | Negative | 1746661 - 1747737 | 41261.2 |
| sugar kinase | DW035_07360 | Not Available | Positive | 1747955 - 1748977 | 37002.7 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | DW035_07365 | Not Available | Positive | 1749016 - 1749684 | 23929.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

