Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ankyrin repeat domain-containing protein | DW035_00530 | Not Available | Negative | 168402 - 169160 | 28596.4 |
| hypothetical protein | DW035_00535 | Not Available | Negative | 169279 - 169575 | 11406.6 |
| hypothetical protein | DW035_00540 | Not Available | Negative | 169767 - 170123 | 13274.9 |
| hypothetical protein | DW035_00545 | Not Available | Negative | 170336 - 170596 | 9605.47 |
| hypothetical protein | DW035_00550 | Not Available | Negative | 170645 - 171088 | 17135.8 |
| duf2750 domain-containing protein | DW035_00555 | Not Available | Negative | 171210 - 171665 | 17423.8 |
| cell filamentation protein fic | DW035_00560 | Not Available | Negative | 172425 - 173423 | 39487.9 |
| hypothetical protein | DW035_00565 | Not Available | Negative | 173426 - 174277 | 32847.0 |
| hypothetical protein | DW035_00570 | Not Available | Negative | 174279 - 174869 | 22825.9 |
| atp-binding protein | DW035_00575 | Not Available | Negative | 174877 - 176253 | 53007.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

