Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3298 domain-containing protein | DW035_06935 | Not Available | Negative | 1656133 - 1656999 | 32092.0 |
| lipoyl(octanoyl) transferase lipb | DW035_06940 | Not Available | Positive | 1657157 - 1657822 | 25234.4 |
| hypothetical protein | DW035_06945 | Not Available | Negative | 1657851 - 1658537 | 26635.7 |
| sugar o-acetyltransferase | DW035_06950 | Not Available | Positive | 1658735 - 1659298 | 20584.0 |
| peptidase | DW035_06955 | Not Available | Negative | 1659516 - 1660067 | 20801.5 |
| hypothetical protein | DW035_06960 | Not Available | Negative | 1660051 - 1660596 | 20480.3 |
| duf4857 domain-containing protein | DW035_06965 | Not Available | Negative | 1660616 - 1661857 | 47427.5 |
| hypothetical protein | DW035_06970 | Not Available | Negative | 1661870 - 1662544 | 25206.0 |
| abc transporter atp-binding protein | DW035_06975 | Not Available | Negative | 1662549 - 1663430 | 33792.0 |
| hypothetical protein | DW035_06980 | Not Available | Negative | 1663456 - 1665060 | 59970.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

