Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AF39-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW035_06830 | Not Available | Negative | 1633804 - 1634613 | 31178.6 |
| hypothetical protein | DW035_06835 | Not Available | Negative | 1634573 - 1634788 | 8786.86 |
| hypothetical protein | DW035_06840 | Not Available | Negative | 1635303 - 1635602 | 11524.9 |
| hypothetical protein | DW035_06845 | Not Available | Negative | 1635665 - 1636573 | 34701.5 |
| hypothetical protein | DW035_06855 | Not Available | Negative | 1636831 - 1637733 | 34685.8 |
| recombinase family protein | DW035_06860 | Not Available | Negative | 1637781 - 1639592 | 70288.9 |
| hypothetical protein | DW035_06865 | Not Available | Positive | 1639639 - 1639875 | 9013.46 |
| duf4858 domain-containing protein | DW035_06870 | Not Available | Negative | 1639889 - 1640815 | 35757.7 |
| nlpc/p60 family protein | DW035_06875 | Not Available | Negative | 1640868 - 1641365 | 18865.7 |
| abc transporter atp-binding protein | DW035_06880 | Not Available | Negative | 1641492 - 1642199 | 26665.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

